Preprocessing of A-root



HOME > Preprocessing


Software:Fiji ImageJ

Flow of preprocessing of image

 1. Making of sequential image
 2. Cutting out of analytical area
 3. Making of background image
 4. Making of difference picture
 5. Making of gray scale image
 6. Adjusting contrasts

1. Making of sequential image
 ImageJ operation : file→import→image sequence
1.jpg

2. Cutting out of analytical area
  ImageJ operation : Selecting analytical area→image→Duplicate
2.jpg
 ImageJ operation : Duplicate stack
2-1.jpg
 Example image
2-2.jpg

3. Making of background image
  ImageJ operation : image→stacks→manupilation→substack maker
3.jpg
ImageJ operation
The number of the image used for the background is input
3-1.jpg

4. Making of difference picture
 ImageJ operation : process→image calculator
4.jpg
ImageJ operation
Image1: File name of sequential image
Image2: File name of background image
Operation: subtract
4-1.jpg

5. Making of gray scale image
 ImageJ operation : image→type→8bit 
5.jpg

6. Adjusting contrasts
 ImageJ operation : image→adjust→color balance
6.jpg
6-1.jpg